Please use this identifier to cite or link to this item: http://cibnor.repositorioinstitucional.mx/jspui/handle/1001/784
Genetic Diversity of the Endemic Xantus’ Hummingbird Using 16 Novel Polymorphic Microsatellite Loci, and Their Cross Amplification between Six Related Species
CRISTINA GONZALEZ RUBIO SANVICENTE
RICARDO RODRIGUEZ ESTRELLA
OSCAR ADRIAN LOZANO GARZA
FRANCISCO JAVIER GARCIA DE LEON
Acceso Abierto
Atribución-NoComercial-SinDerivadas
DOI:10.4236/ojgen.2016.61003
ISSN: 2162-4461
URL: http://www.scirp.org/journal/ojgen
Baja California Peninsula, Hylocharis xantusii, Microsatellites, Pyrosequencing, Cross-Species Amplification
"A set of 16 microsatellite loci was developed and characterized for the Xantus’ hummingbird (Hylocharis xantusii) by using 454 next-generation sequencing. Twenty-five H. xantusii samples from one population were genotyped; all loci were polymorphic, with the number of alleles ranging from three to ten. The mean observed heterozygosity was 0.681 for all loci. No significant linkage disequilibrium was detected, but five loci (Hxan05, 06, 09, 13 and 14) showed deviation from Hardy-Weinberg equilibrium. These microsatellite loci are the first to be characterized for H. xantusii. A moderate to high level of cross-species amplification was observed across the six hummingbird species (31% - 87.5%), with the best cross amplification results observed in the closest related species (H. leucotis, Cynanthus latirostris, Calypte costae). The availability of these molecular tools allows assessing questions integrating population genetics, ecology, conservation, and evolutionary history for H. xantusii and for other phyogenetically related species."
Scientific Research Publishing, Inc.
2016
Artículo
Open Journal of Genetics
Inglés
González-Rubio, C., Rodríguez-Estrella, R., Lozano-Garza, O.A. and García-De-León, F.J. (2016) Genetic Diversity of the Endemic Xantus’ Hummingbird Using 16 Novel Polymorphic Microsatellite Loci, and Their Cross Amplification between Six Related Species. Open Journal of Genetics, 6, 19-27.
GENÉTICA ANIMAL
Versión publicada
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